NEWS
ipsecr 1.4.1 (2024-01-15)
New features or changed behaviour of old functions
ipsecr 1.4.0 (2023-01-13)
New features or changed behaviour of old functions
- user-defined extra parameters in ipsecr.fit (see vignette for example)
- proxy.ms() binomial glm uses cloglog link instead of logit (for consistency)
Other
- suggests spatstat (for example in vignette)
- 'Preparing cluster' memo reports ncores and type
- dots argument added to simpop and simCH for flexibility
- forking parallel cluster on Unix now optional (details$forkOnUnix)
- simCH uses R::Rexp instead of Armadillo random stream (for control of seed)
- ipsecr.fit() number of proxies may exceed number of coefficients
- exports internal function detectionDesignData() used by proxy.ms()
- depends secr 4.5.8
Bugs fixed
- simCH could hang when used with multiple cores on Unix (RcppArmadillo problem fixed by avoiding arma::exp)
ipsecr 1.3.0 (2022-09-09)
New features or changed behaviour of old functions
- improved simulator (estimates differ slightly)
Bugs fixed
- inconsistent single-catch results on arm64 ('M1') Mac
Other
- explicit RNGkind in tests
- vignette edits
- simCH uses RcppArmadillo
ipsecr 1.2.0 (2022-08-29)
New features or changed behaviour of old functions
- individual-specific detection
- new routine output (var.sim, sim.lm)
- optional output (details$keep.sim)
- max.nsim set to 200 and applies per vertex per box
- plotProxy()
- plot3D.IP() for visualising design and simulations
- internal functions rpsv, rpsvi exported
Bugs fixed
- proxyfn1() spurious 'zippin' estimates
- vcov.ipsecr failed with non-null realnames
Other
- remove design, design0 from output object
- proxyfn0() defunct
- shortened test ipsecr.fit; other new tests
- links to RcppArmadillo
ipsecr 1.1.2 (2022-06-26)
New features or changed behaviour of old functions
Bugs fixed
- C++ memory issue with single-catch + nontarget
Other
- citation points to CRAN
- improved vignette
ipsecr 1.1.1 (2022-06-20)
New features or changed behaviour of old functions
- revised count detector simulations
Other
ipsecr 1.1.0
New features or changed behaviour of old functions
- session-level models
- ipsecr.fit() acquires argument 'sessioncov'
- builtin proxyfn 'proxy.ms' for multi-session data
Other
- check adequate max.nsim
- requireNamespace FrF2 quietly
- remove proxyfn2 (=proxy.nt) - capability now in proxy.ms